SubsetCorrelationMatrix — SubsetCorrelationMatrix • BigSur

SubsetCorrelationMatrix

Usage

SubsetCorrelationMatrix(
  seuratObject,
  pCutoff = F,
  minPosCorr = F,
  minNegCorr = F,
  genes = F
)

seuratObject: Seurat object containing correlations matrix produced by BigSur.
pCutoff: Boolean, Float. p-value threshold for correlations. Correlations with p-values larger than pCutoff will be set to 0.
minPosCorr: Boolean, Float. Minimum positive correlation cutoff. Positive correlations with coefficients under minPosCorr will be set to 0.
minNegCorr: Boolean, Float. Minimum negative correlation cutoff. Negative correlations with absolute values under abs(minNegCorr) will be set to 0.
genes: Boolean, Character Vector. The set of genes for the correlation matrix to be subset to.

Sparse matrix (dsCMatrix) containing correlations meeting subset criteria.